Myf5 myogenic factor 5 [Mus musculus (house mouse)] - Gene (2024)

Summary

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Official Symbol
Myf5provided by MGI
Official Full Name
myogenic factor 5provided by MGI
Primary source
MGI:MGI:97252
See related
Ensembl:ENSMUSG00000000435 AllianceGenome:MGI:97252
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Myf-5; bHLHc2; B130010J22Rik
Summary
Enables DNA-binding transcription activator activity, RNA polymerase II-specific and sequence-specific DNA binding activity. Acts upstream of or within several processes, including animal organ development; regulation of cell-matrix adhesion; and somitogenesis. Predicted to be located in nucleoplasm. Is expressed in several structures, including alimentary system; brain; embryo mesenchyme; genitourinary system; and skeletal musculature. Orthologous to human MYF5 (myogenic factor 5). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in limb E14.5 (RPKM 2.7), ovary adult (RPKM 0.6) and 1 other tissue See more
Orthologs
human all
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Genomic context

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Location:
10 D1; 10 55.95 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (107318769..107322787, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (107482908..107486927, complement)

Chromosome 10 - NC_000076.7Myf5 myogenic factor 5 [Mus musculus (house mouse)] - Gene (1)Neighboring gene predicted gene, 29674Neighboring gene lin-7 hom*olog A, crumbs cell polarity complex componentNeighboring gene STARR-seq mESC enhancer starr_27782Neighboring gene STARR-seq mESC enhancer starr_27784Neighboring gene myogenic factor 6Neighboring gene STARR-seq mESC enhancer starr_27785Neighboring gene protein tyrosine phosphatase receptor type Q

Genomic regions, transcripts, and products

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Go to reference sequence details

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Dysregulation of local stem/progenitor cells as a common cellular mechanism for heterotopic ossification. Kan L, et al. Stem Cells, 2009 Jan. PMID 18832590, Free PMC Article
  2. The myogenic factor Myf5 supports efficient skeletal muscle regeneration by enabling transient myoblast amplification. Ustanina S, et al. Stem Cells, 2007 Aug. PMID 17495111
  3. Control of Myf5 activation in adult skeletal myonuclei requires ERK signalling. Perez-Ruiz A, et al. Cell Signal, 2007 Aug. PMID 17481856
  4. A homeo-paired domain-binding motif directs Myf5 expression in progenitor cells of limb muscle. Buchberger A, et al. Development, 2007 Mar. PMID 17301086
  5. Muscle satellite cells and endothelial cells: close neighbors and privileged partners. Christov C, et al. Mol Biol Cell, 2007 Apr. PMID 17287398, Free PMC Article

See all (547) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

  1. A dual-color PAX7 and MYF5 in vivo reporter to investigate muscle stem cell heterogeneity in regeneration and aging.

    Title: A dual-color PAX7 and MYF5 invivo reporter to investigate muscle stem cell heterogeneity in regeneration and aging.

  2. Dnmt3b Deficiency in Myf5(+)-Brown Fat Precursor Cells Promotes Obesity in Female Mice.

    Title: Dnmt3b Deficiency in Myf5(+)-Brown Fat Precursor Cells Promotes Obesity in Female Mice.

  3. PUFA Treatment Affects C2C12 Myocyte Differentiation, Myogenesis Related Genes and Energy Metabolism.

    Title: PUFA Treatment Affects C2C12 Myocyte Differentiation, Myogenesis Related Genes and Energy Metabolism.

  4. MLL1 facilitates proliferation of myoblasts and Pax7-positive satellite cells by epigenetically regulating Myf5.

    Title: MLL1 promotes myogenesis by epigenetically regulating Myf5.

  5. The induction phase of primary Myf5+ brown adipogenesis.

    Title: STAT3 suppresses Wnt/β-catenin signaling during the induction phase of primary Myf5+ brown adipogenesis.

  6. Asymmetrically dividing muscle stem cells in skeletal muscle give rise to committed cells, where the myogenic determination factor Myf5 is transcriptionally activated by Pax7.

    Title: The Dystrophin Glycoprotein Complex Regulates the Epigenetic Activation of Muscle Stem Cell Commitment.

  7. An absolute requirement for either MyoD or Myf5 in muscle regeneration.

    Title: Loss of MyoD and Myf5 in Skeletal Muscle Stem Cells Results in Altered Myogenic Programming and Failed Regeneration.

  8. Novel RNA-binding activity of MYF5 enhances Ccnd1 mRNA translation during myogenesis.

    Title: Novel RNA-binding activity of MYF5 enhances Ccnd1/Cyclin D1 mRNA translation during myogenesis.

  9. Transcription of the skeletal muscle program is achieved by the expression of MyoD, which binds to the same sites as Myf5, indicating that each factor regulates distinct steps in gene initiation and transcription at a shared set of binding sites

    Title: Distinct Activities of Myf5 and MyoD Indicate Separate Roles in Skeletal Muscle Lineage Specification and Differentiation.

  10. The Myf5- and Myogenin-deficient mice showed a partial or complete, respectively, loss of TMC in an otherwise regularly structured thymus.

    Title: Myf5 and Myogenin in the development of thymic myoid cells - Implications for a murine in vivo model of myasthenia gravis.

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Gene Ontology Provided by MGI

Process Evidence Code Pubs
acts_upstream_of_or_within camera-type eye development IMP

Inferred from Mutant Phenotype
more info

PubMed
acts_upstream_of_or_within cartilage condensation IMP

Inferred from Mutant Phenotype
more info

PubMed
acts_upstream_of_or_within cell differentiation IEA

Inferred from Electronic Annotation
more info

acts_upstream_of_or_within embryonic skeletal system morphogenesis IMP

Inferred from Mutant Phenotype
more info

PubMed
acts_upstream_of_or_within extracellular matrix organization IMP

Inferred from Mutant Phenotype
more info

PubMed
acts_upstream_of_or_within multicellular organism development IEA

Inferred from Electronic Annotation
more info

acts_upstream_of_or_within muscle organ development IGI

Inferred from Genetic Interaction
more info

PubMed
acts_upstream_of_or_within muscle organ development IMP

Inferred from Mutant Phenotype
more info

PubMed
acts_upstream_of_or_within muscle organ morphogenesis IGI

Inferred from Genetic Interaction
more info

PubMed
acts_upstream_of_or_within muscle tissue morphogenesis IGI

Inferred from Genetic Interaction
more info

PubMed
acts_upstream_of_or_within muscle tissue morphogenesis IMP

Inferred from Mutant Phenotype
more info

PubMed
acts_upstream_of_or_within ossification IMP

Inferred from Mutant Phenotype
more info

PubMed
involved_in positive regulation of myoblast differentiation IBA

Inferred from Biological aspect of Ancestor
more info

involved_in positive regulation of skeletal muscle fiber development IBA

Inferred from Biological aspect of Ancestor
more info

acts_upstream_of_or_within positive regulation of transcription by RNA polymerase II IDA

Inferred from Direct Assay
more info

PubMed
acts_upstream_of_or_within positive regulation of transcription by RNA polymerase II IMP

Inferred from Mutant Phenotype
more info

PubMed
involved_in regulation of DNA-templated transcription IEA

Inferred from Electronic Annotation
more info

acts_upstream_of_or_within regulation of cell-matrix adhesion IMP

Inferred from Mutant Phenotype
more info

PubMed
involved_in regulation of transcription by RNA polymerase II IBA

Inferred from Biological aspect of Ancestor
more info

involved_in skeletal muscle cell differentiation IBA

Inferred from Biological aspect of Ancestor
more info

acts_upstream_of_or_within skeletal muscle cell differentiation IMP

Inferred from Mutant Phenotype
more info

PubMed
acts_upstream_of_or_within skeletal muscle tissue development IGI

Inferred from Genetic Interaction
more info

PubMed
acts_upstream_of_or_within skeletal muscle tissue development IMP

Inferred from Mutant Phenotype
more info

PubMed
acts_upstream_of_or_within somitogenesis IMP

Inferred from Mutant Phenotype
more info

PubMed
Component Evidence Code Pubs
located_in nucleoplasm ISO

Inferred from Sequence Orthology
more info

located_in nucleus TAS

Traceable Author Statement
more info

PubMed

General protein information

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Preferred Names
myogenic factor 5
Names
myogenic regulatory factor MYF-5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_008656.5NP_032682.1 myogenic factor 5

    See identical proteins and their annotated locations for NP_032682.1

    Status: VALIDATED

    Source sequence(s)
    AK044894, AK083402
    Consensus CDS
    CCDS24161.1
    UniProtKB/Swiss-Prot
    P24699, Q543W7
    UniProtKB/TrEMBL
    A2RSK4
    Related
    ENSMUSP00000000445.2, ENSMUST00000000445.2
    Conserved Domains (3) summary
    smart00520
    Location:188
    BASIC; Basic domain in HLH proteins of MYOD family
    pfam12232
    Location:143214
    Myf5; Myogenic determination factor 5
    cd18937
    Location:83146
    bHLH_TS_Myf5; basic helix-loop-helix (bHLH) domain found in myogenic factor 5 (Myf-5) and similar proteins

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7Reference GRCm39 C57BL/6J

    Range
    107318769..107322787 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006513319.3XP_006513382.1 myogenic factor 5 isoform X1

    See identical proteins and their annotated locations for XP_006513382.1

    UniProtKB/Swiss-Prot
    P24699, Q543W7
    UniProtKB/TrEMBL
    A2RSK4
    Conserved Domains (3) summary
    smart00520
    Location:188
    BASIC; Basic domain in HLH proteins of MYOD family
    pfam12232
    Location:143214
    Myf5; Myogenic determination factor 5
    cd18937
    Location:83146
    bHLH_TS_Myf5; basic helix-loop-helix (bHLH) domain found in myogenic factor 5 (Myf-5) and similar proteins

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Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P24699.1 GenPept UniProtKB/Swiss-Prot:P24699

Additional links

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Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases

Myf5 myogenic factor 5 [Mus musculus (house mouse)] - Gene (2024)

FAQs

What is the function of Myf5? ›

Myogenic factor 5 is a protein that in humans is encoded by the MYF5 gene. It is a protein with a key role in regulating muscle differentiation or myogenesis, specifically the development of skeletal muscle. Myf5 belongs to a family of proteins known as myogenic regulatory factors (MRFs).

Which cells in your body have the myogenin gene? ›

Muscle progenitor cells differentiate into myoblasts that express the MRFs. MyoD (Mvodl) and Myf5. Proliferating myoblasts withdraw from the cell cycle to become terminally differentiated myocytes that express muscle-specific genes such as myogenin (Myog).

What is myogenic factor? ›

In subject area: Pharmacology, Toxicology and Pharmaceutical Science. Myogenic regulatory factors are a group of transcription factors that induce the transcription of skeletal muscle proteins and coordinate satellite cell differentiation.

What is the function of the myogenin gene? ›

Myogenin is a muscle-specific basic-helix-loop-helix (bHLH) transcription factor involved in the coordination of skeletal muscle development or myogenesis and repair.

What is myogenesis in biology? ›

Myogenesis: The Development of Muscle - Developmental Biology - NCBI Bookshelf. The .

What is the function of the holin protein? ›

The term holin was coined to denote proteins that form lethal and non-specific holes in the IM. As established in coliphage systems, the holin has two roles, serving to release the endolysin into the periplasm as well as to function as the “lysis clock”.

What is myogenic muscle? ›

Myogenic activity refers to the ability of a muscle to contract reflexively without nervous stimulation. Smooth and cardiac muscle both possess myogenic activity. Both the muscles are involuntary muscles. Skeletal muscles are closely associated with skeletal components in the human body.

What is myogenin a marker for? ›

Myogenin is a Specific Marker for Rhabdomyosarcoma: An Immunohistochemical Study in Paraffin-Embedded Tissues | Modern Pathology.

What is the gene MyoD responsible of? ›

MyoD plays an important role in determining diaphragmatic contractile properties. MyoD recruits cdk9/cyclin T2, together with the histone acetyltransferases p300 and PCAF, and the chromatin remodeling complex SWI/SNF, on promoters and enhancers of muscle-specific genes.

What is a myogenic disease? ›

Myogenic conditions may involve individual extraocular muscles or a combination and are often bilateral conditions. Thyroid eye disease. The wet phase of the thyroid ocular condition is a myogenic disorder that often progresses to a mechanical condition.

What does myogenic mean in medical terms? ›

adjective. myo·​gen·​ic ˌmī-ə-ˈje-nik. : taking place or functioning in ordered rhythmic fashion because of the inherent properties of cardiac muscle rather than specific neural stimuli. a myogenic heartbeat.

Where is myogenic found in the body? ›

Since the heartbeat is initiated by the SA node and the impulse of contraction originates in the heart itself, the human heart is termed myogenic. The hearts of vertebrates and molluscs are also myogenic.

How does the MyoD protein work? ›

MyoD translocates to the nucleus to act as a transcription factor and also physically interacts with CDK4 to inhibit cell proliferation by inducing cell cycle arrest. (3) MyoD heterodimerizes with E-proteins to directly transactivate genes required to initiate myogenic differentiation, such as myogenin.

What is the function of the MYB gene? ›

MYB acts on MAPK signaling by directly regulating transcription of the gene encoding the negative modulator SPRY2. HBXIP up-regulates YAP expression via activating transcription factor c-Myb to facilitate the growth of hepatoma cells. c-myb overexpression is associated with Breast Cancer Invasion and Metastasis.

What is the function of the MFD gene? ›

Mutation frequency decline (Mfd) is a bacterial ATP-dependent DNA translocase that couples DNA repair to transcription via hydrolyzing ATP as energy, which preferentially acts on the damaged DNA transcribed strand to rescue stalled RNAP or dissociate RNAP to terminate the transcription depending on impediment severity, ...

What is the function of the Desmoglein protein? ›

Desmoglein-1 (DSG1), a desmosomal protein, maintains the structure of epidermis through its adhesive function. However, heterozygous mutations in DSG1 in humans result in abnormal differentiation, as does downregulation of DSG1 in human skin organ culture, suggesting that it may have important signaling functions.

What is the function of the Neuroligin protein? ›

Neuroligin 1 is a protein that contains a cholinesterase-like domain and is involved in synaptic localization through binding with neurexin. It has glycosylation sites in its extracellular region and plays a role in regulating synaptic connections.

What is the function of the Perlecan protein? ›

The roles that perlecan may play are vast. For example, perlecan is involved in regulating skin and endochondral bone formation [127,148], modulation of lipid metabolism [149], cell adhesion and cell death [150–152], and osteophyte formation [153].

What is the function of the Wuschel protein? ›

The WUSCHEL (WUS) protein plays a central role in the maintenance of stem cell populations in shoot and floral meristems (Laux et al., 1996; Mayer et al., 1998; Veit, 2004). WUS positively regulates the size of each shoot meristem by maintaining the appropriate number of pluripotent stem cells in each shoot meristem.

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